msconvert version 3.0.18116 (SourceForge net)
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msconvert version 3.0.18116
Msconvert Version 3.0.18116, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/msconvert+version+3%2E0%2E18116/msconvert+version+3+0+18116/pmc10692727-331-18-23
Average 90 stars, based on 1 article reviews
Msconvert Version 3.0.18116, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/msconvert+version+3%2E0%2E18116/msconvert+version+3+0+18116/pmc10692727-331-18-23
Average 90 stars, based on 1 article reviews
msconvert version 3.0.18116 - by Bioz Stars,
2026-10
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Mass Spectrometry:Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome dynamics analysis: For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) (29) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2 H Atoms and Proteomics Analysis of a Single Labelled Sample. Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29 th , 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome Dynamics Analysis For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) ( 29 ) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2H Atoms and Proteomics Analysis of a Single Labeled Sample Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Huwe1 loss protects mice from non-alcoholic fatty liver disease through lipid metabolic rewiring Article Snippet: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Transformation Assay:Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome dynamics analysis: For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) (29) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2 H Atoms and Proteomics Analysis of a Single Labelled Sample. Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29 th , 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome Dynamics Analysis For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) ( 29 ) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2H Atoms and Proteomics Analysis of a Single Labeled Sample Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Huwe1 loss protects mice from non-alcoholic fatty liver disease through lipid metabolic rewiring Article Snippet: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Software:Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome dynamics analysis: For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) (29) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2 H Atoms and Proteomics Analysis of a Single Labelled Sample. Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29 th , 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome Dynamics Analysis For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) ( 29 ) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2H Atoms and Proteomics Analysis of a Single Labeled Sample Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Huwe1 loss protects mice from non-alcoholic fatty liver disease through lipid metabolic rewiring Article Snippet: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Tandem Mass Spectroscopy:Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome dynamics analysis: For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) (29) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2 H Atoms and Proteomics Analysis of a Single Labelled Sample. Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29 th , 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome Dynamics Analysis For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) ( 29 ) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2H Atoms and Proteomics Analysis of a Single Labeled Sample Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Huwe1 loss protects mice from non-alcoholic fatty liver disease through lipid metabolic rewiring Article Snippet: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Modification:Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome dynamics analysis: For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) (29) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2 H Atoms and Proteomics Analysis of a Single Labelled Sample. Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29 th , 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Mitochondrial Defects in a Nonalcoholic Fatty Liver Disease Mouse Model Are Associated with Increased Degradation of Oxidative Phosphorylation Subunits Article Snippet: Proteome Dynamics Analysis For protein identification, all the MS/MS spectra obtained from the mass spectrometer were transformed into a Mascot Generic Format (MGF) peak list file using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MGF file was searched using the Mascot 2.3 (Matrix Science, London, UK) software against the Mouse MitoCarta 2.0 mitochondrial protein database released on 2015 (containing 1520 entries) ( 29 ) with cysteine carbamidomethylation as fixed modification and methionine oxidation and lysine acetylation as variable modifications, respectively, and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Calculation of the Protein Turnover Rate Using the Number of Incorporated 2H Atoms and Proteomics Analysis of a Single Labeled Sample Article Snippet: Data analysis: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 (http://proteowizard.sourceforge.net/tools), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. Article Title: Hepatic Huwe1 loss protects mice from non-alcoholic fatty liver disease through lipid metabolic rewiring Article Snippet: For protein identification, all the spectra obtained from the mass spectrometer were transformed into mzML file format using ProteoWizard MSconvert Version 3.0.18116 ( http://proteowizard.sourceforge.net/tools ), and the MZML files were searched using Mascot software (Matrix Science, London, UK) version 2.3 against the mouse subset of the UniProt protein database released on June 29th, 2016 (containing 149,730 entries) with cysteine carbamidomethylation as fixed and methionine oxidation as variable modifications and trypsin digestion with a maximum of two missed cleavages per peptide. |